8HFB
Evolved variant of quercetin 2,4-dioxygenase from Bacillus subtilis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-09-26 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.000030 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 94.299, 125.211, 119.008 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.190 - 2.240 |
R-factor | 0.21517 |
Rwork | 0.213 |
R-free | 0.25100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2h0v |
RMSD bond length | 0.002 |
RMSD bond angle | 1.173 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.250 |
High resolution limit [Å] | 2.210 | 6.000 | 2.210 |
Rmerge | 0.108 | 0.066 | 0.811 |
Number of reflections | 62098 | 3150 | 3133 |
<I/σ(I)> | 4.7 | ||
Completeness [%] | 99.3 | 100 | 99.3 |
Redundancy | 6.2 | 7.3 | 5.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.25 | 295 | 18% PEG 3350, 0.1 M HEPES pH 7.25, 0.2 M CaCl2 |