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8H6I

The crystal structure of SARS-CoV-2 3C-like protease Double Mutant (L50F and E166V) in complex with a traditional Chinese Medicine Inhibitors

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL02U1
Synchrotron siteSSRF
BeamlineBL02U1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-09-28
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.978490
Spacegroup nameC 1 2 1
Unit cell lengths115.038, 53.703, 44.505
Unit cell angles90.00, 102.93, 90.00
Refinement procedure
Resolution43.380 - 1.900
R-factor0.2007
Rwork0.198
R-free0.22730
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7vic
Data reduction softwareautoPROC
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]43.38043.3802.010
High resolution limit [Å]1.9005.6701.900
Rmerge0.0750.0950.426
Rmeas0.0820.1040.464
Number of reflections208548163279
<I/σ(I)>12.1518.445.02
Completeness [%]98.897.797.3
Redundancy6.5026.276.263
CC(1/2)0.9960.9900.948
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION2930.2% w/v Lidocaine hydrochloride monohydrate, 0.2% w/v Procaine hydrochloride, 0.2% w/v Proparacaine hydrochloride, 0.2% w/v tetracaine hydrochloride, 0.1 M Buffer System 2 pH 7.5 (sodium HEPES, MOPS acid), 20% v/v ethylene glycol, 10% w/v PEG 8,000

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