8H5Z
Crystal structure of RadD/ATP analogue complex
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL19U1 |
| Synchrotron site | SSRF |
| Beamline | BL19U1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-07-12 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.97929 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 82.589, 79.168, 109.824 |
| Unit cell angles | 90.00, 99.84, 90.00 |
Refinement procedure
| Resolution | 19.976 - 3.000 |
| R-factor | 0.241566454112 |
| Rwork | 0.239 |
| R-free | 0.28093 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6jde |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.670 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.12-2829_1692) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 20.000 | 3.120 |
| High resolution limit [Å] | 3.000 | 3.000 |
| Number of reflections | 38570 | 1910 |
| <I/σ(I)> | 14.3 | |
| Completeness [%] | 99.8 | |
| Redundancy | 6.5 | |
| CC(1/2) | 0.795 | 0.795 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 286 | 500 mM NaCl, 5 mM MgCl2 and 18% [w/v] PEG3350 |
