8GVJ
Crystal structure of cMET kinase domain bound by D6808
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-09-08 |
Detector | ADSC QUANTUM 1 |
Wavelength(s) | 0.979183 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 66.078, 66.078, 187.302 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.380 - 2.710 |
R-factor | 0.2206 |
Rwork | 0.218 |
R-free | 0.26170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6sde |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.380 | 2.807 |
High resolution limit [Å] | 2.710 | 2.710 |
Rmerge | 0.032 | |
Number of reflections | 23949 | 2336 |
<I/σ(I)> | 13.31 | |
Completeness [%] | 99.9 | |
Redundancy | 11.4 | |
CC(1/2) | 0.997 | 0.896 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 25% PEG 8K |