8GRH
Crystal structure of a constitutively active mutant of the alpha gamma heterodimer of human IDH3 in complex with CIT
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NFPSS BEAMLINE BL19U1 |
Synchrotron site | NFPSS |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-24 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9778 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 111.992, 111.992, 145.925 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.642 - 2.506 |
R-factor | 0.219 |
Rwork | 0.217 |
R-free | 0.25940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5grh |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX (1.14_3260) |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.590 |
High resolution limit [Å] | 2.500 | 5.380 | 2.500 |
Rmerge | 0.123 | 0.054 | 0.757 |
Rmeas | 0.127 | 0.056 | 0.785 |
Rpim | 0.029 | 0.013 | 0.198 |
Total number of observations | 703070 | ||
Number of reflections | 36769 | 3883 | 3550 |
<I/σ(I)> | 3.5 | ||
Completeness [%] | 99.7 | 100 | 97.4 |
Redundancy | 19.1 | 18 | 13.4 |
CC(1/2) | 0.999 | 0.953 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.02 M citric acid, 0.08 M Bis-tris propane (pH 8.8) and 16% (w/v) PEG 3350 |