8GRF
Crystal structure of F-box protein in the ternary complex with adaptor protein Skp1(DL) and its substrate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-06-24 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 0.900 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 77.407, 150.976, 160.384 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.640 - 2.530 |
R-factor | 0.2164 |
Rwork | 0.215 |
R-free | 0.24770 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.426 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.640 | 2.620 |
High resolution limit [Å] | 2.530 | 2.530 |
Number of reflections | 63124 | 6158 |
<I/σ(I)> | 24.58 | 4.09 |
Completeness [%] | 99.2 | |
Redundancy | 6.9 | |
CC(1/2) | 0.997 | 0.828 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 70 mM Na citrate pH 5.5, 10.5% (w/v) PEG 6000 |