8GLF
Crystal Structure of Human CD1b in Complex with Sphingomyelin C34:2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-03-14 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9376 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 57.570, 77.980, 91.320 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.860 - 2.000 |
R-factor | 0.178 |
Rwork | 0.176 |
R-free | 0.23100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6d64 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.700 | 2.050 |
High resolution limit [Å] | 2.000 | 2.000 |
Rpim | 0.077 | 0.489 |
Number of reflections | 27135 | 1897 |
<I/σ(I)> | 9.3 | 2.1 |
Completeness [%] | 95.7 | 92.2 |
Redundancy | 11.4 | 10 |
CC(1/2) | 0.990 | 0.720 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 28% PEG3350, 0.2 M sodium iodide |