Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8GIF

Crystal structure of a designed single-component Plasmodium falciparum AMA1-RON2L insertion fusion immunogen 3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2021-04-02
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0
Spacegroup nameP 1 21 1
Unit cell lengths40.360, 62.920, 60.010
Unit cell angles90.00, 96.25, 90.00
Refinement procedure
Resolution19.710 - 2.100
R-factor0.1719
Rwork0.170
R-free0.21570
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.482
Data reduction softwareXDS (v Feb 5, 2021)
Data scaling softwareXDS (v Feb 5, 2021)
Phasing softwarePHENIX (1.20.1_4487)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]19.7102.176
High resolution limit [Å]2.1002.101
Rmerge0.0690.166
Rmeas0.0820.202
Rpim0.0440.113
Number of reflections172361600
<I/σ(I)>12.075.41
Completeness [%]98.492.38
Redundancy3.22.8
CC(1/2)0.9940.953
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP291.150.2 M Magnesium chloride, 0.1 M Tris (pH 8.5), 20 % (w/v) PEG 8000

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon