8G2H
Crystal Structure of PRMT4 with Compound YD1113
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-06-11 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 84.215, 84.215, 130.426 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.660 - 1.490 |
R-factor | 0.17147 |
Rwork | 0.171 |
R-free | 0.17745 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.470 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.520 |
High resolution limit [Å] | 1.490 | 1.490 |
Rmerge | 0.065 | 0.945 |
Number of reflections | 87534 | 4297 |
<I/σ(I)> | 12.6 | 2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 8.2 | 8.1 |
CC(1/2) | 0.998 | 0.750 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.2 M Calcium chloride dihydrate, 0.05 M HEPES sodium pH 7.5, 28% v/v Polyethylene glycol 400, 0.002 M Spermine |