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8FTU

Crystal structure of the SNARE Use1 bound to Dsl1 complex subunits Sec39 and Dsl1, Revised Use1 structure

Replaces:  6WC4
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-1
Synchrotron siteNSLS-II
Beamline17-ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-06-14
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.97932
Spacegroup nameC 1 2 1
Unit cell lengths240.790, 87.846, 161.431
Unit cell angles90.00, 107.61, 90.00
Refinement procedure
Resolution29.600 - 5.730
R-factor0.2782
Rwork0.276
R-free0.29800
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.014
RMSD bond angle1.856
Data reduction softwareXDS
Data scaling softwareAimless (0.7.3)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.17.1-3660-000)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.60129.6016.645
High resolution limit [Å]5.72612.0065.726
Rmerge0.1150.0521.814
Rmeas0.1350.0612.171
Rpim0.0700.0321.184
Number of reflections705310071008
<I/σ(I)>10.726.41.1
Completeness [%]74.710029.8
Redundancy6.86.76.4
CC(1/2)0.9970.9970.319
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52950.1 M Tris, pH 7.5, 0.1 M NaCl, 8% (w/v) PEG 3350, 10% (v/v) ethylene glycol, 1 mM dithiothreitol. Cryoprotected with 30% (v/v) ethylene glycol

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PDB entries from 2024-11-13

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