8FJV
Human GAR transformylase in complex with GAR substrate and AGF362 inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2020-06-25 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.000 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 74.943, 74.943, 101.015 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.864 - 2.690 |
R-factor | 0.1941 |
Rwork | 0.192 |
R-free | 0.24460 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.014 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.13-2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.864 | 2.820 |
High resolution limit [Å] | 2.690 | 2.690 |
Rmerge | 0.305 | 2.887 |
Rmeas | 0.322 | 3.037 |
Rpim | 0.101 | 0.938 |
Number of reflections | 9539 | 1238 |
<I/σ(I)> | 8 | |
Completeness [%] | 100.0 | |
Redundancy | 10.2 | |
CC(1/2) | 0.993 | 0.347 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | 0.1 M Tris (pH 7.5), 0.333 mM NaCl, 20% polyethylene glycol (PEG) 4000, and 2% PEG 400 |