8EOO
Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing human antibodies WRAIR-2063 and WRAIR-2151
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-02-23 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 97.066, 97.409, 141.129 |
Unit cell angles | 90.00, 99.76, 90.00 |
Refinement procedure
Resolution | 19.950 - 2.770 |
R-factor | 0.1956 |
Rwork | 0.194 |
R-free | 0.25510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7n4m |
RMSD bond angle | 15.178 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 139.090 | 2.830 |
High resolution limit [Å] | 2.760 | 2.760 |
Rmerge | 0.140 | 1.313 |
Rmeas | 0.151 | |
Rpim | 0.057 | 0.592 |
Number of reflections | 65626 | 3949 |
<I/σ(I)> | 11 | 1 |
Completeness [%] | 98.7 | 86.1 |
Redundancy | 6.9 | 5.4 |
CC(1/2) | 0.996 | 0.699 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 100 mM Bis-Tris propane HCl pH 8.5, 200 mM Na malonate dibasic, 20% w/v PEG 3350 |