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8EL2

SARS-CoV-2 RBD bound to neutralizing antibody Fab ICO-hu23

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2021-04-21
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.033
Spacegroup nameP 32 2 1
Unit cell lengths140.300, 140.300, 202.750
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution46.780 - 2.890
R-factor0.2404
Rwork0.239
R-free0.28150
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7beh
RMSD bond length0.006
RMSD bond angle1.025
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.7802.980
High resolution limit [Å]2.8902.890
Number of reflections522654458
<I/σ(I)>11.71
Completeness [%]99.998.6
Redundancy109.9
CC(1/2)0.9980.317
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529310% PEG 8000, 0.1 M MES at pH 5.5, 0.2 M zinc acetate, 3% ethylene glycol, 3% glycerol, 10 mM cadmium chloride hydrate, 4% v/v polypropylene glycol P 400, 3% v/v 2-propanol

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