8EK9
Crystal structure of the class A carbapenemase CRH-1 in complex with avibactam at 1.4 Angstrom resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-16 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.885601 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 36.500, 73.790, 51.530 |
Unit cell angles | 90.00, 92.64, 90.00 |
Refinement procedure
Resolution | 42.220 - 1.400 |
R-factor | 0.1957 |
Rwork | 0.195 |
R-free | 0.21900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4eqi |
RMSD bond length | 0.010 |
RMSD bond angle | 1.212 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX (1.19.2_4158) |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.220 | 1.480 |
High resolution limit [Å] | 1.400 | 1.400 |
Rmeas | 0.033 | 1.007 |
Number of reflections | 53514 | 8539 |
<I/σ(I)> | 24.24 | 1.76 |
Completeness [%] | 99.6 | 98.9 |
Redundancy | 6.87 | 6.82 |
CC(1/2) | 1.000 | 0.814 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.6 | 294 | 22% (w/v) PEG 4,000 + 0.2 M lithium chloride + 0.1 M Tris-HCl pH 7.6 |