8EIA
Crystal structure of beta-catenin and the MDM2 p53-binding domain in complex with H333, a Helicon Polypeptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-11 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.92010 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.810, 96.066, 76.790 |
Unit cell angles | 90.00, 106.62, 90.00 |
Refinement procedure
Resolution | 47.730 - 3.600 |
R-factor | 0.3555 |
Rwork | 0.354 |
R-free | 0.37270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7uwi |
RMSD bond length | 0.003 |
RMSD bond angle | 0.581 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.030 | 3.940 |
High resolution limit [Å] | 3.600 | 3.600 |
Rmerge | 0.241 | 0.912 |
Number of reflections | 7517 | 1803 |
<I/σ(I)> | 5.3 | 1.7 |
Completeness [%] | 92.3 | 94.29 |
Redundancy | 5.5 | 5.4 |
CC(1/2) | 0.978 | 0.491 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | 0.1 M Potassium chloride, 0.1 M HEPES pH 7, 15% w/v PEG 5000 MME |