8EHV
Kelch domain of human KEAP1 bound to Nrf2 cyclic peptide, c[DhA-GDPET(bAla)E]
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-23 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.977 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 162.349, 68.849, 77.215 |
Unit cell angles | 90.00, 117.63, 90.00 |
Refinement procedure
Resolution | 29.580 - 2.290 |
R-factor | 0.206 |
Rwork | 0.203 |
R-free | 0.25300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5wfv |
RMSD bond length | 0.019 |
RMSD bond angle | 1.750 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.580 | 2.372 |
High resolution limit [Å] | 2.290 | 2.290 |
Rmerge | 0.151 | 0.892 |
Rmeas | 0.164 | 0.973 |
Rpim | 0.063 | 0.381 |
Number of reflections | 34135 | 3336 |
<I/σ(I)> | 11.2 | 2.1 |
Completeness [%] | 99.8 | 99.31 |
Redundancy | 6.7 | 6.1 |
CC(1/2) | 0.996 | 0.761 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 290 | 1.2-1.6 M ammonium sulfate, 100 mM Bis-Tris pH 6.5, 0.2-0.8% PEG-550 monomethyl ether |