Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8EE5

Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ119-D in complex with ZIKV E glycoprotein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-1
Synchrotron siteNSLS-II
Beamline17-ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-10-18
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.97
Spacegroup nameP 21 2 21
Unit cell lengths51.681, 103.672, 196.698
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution14.994 - 3.583
R-factor0.2513
Rwork0.249
R-free0.29640
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6nip
RMSD bond length0.003
RMSD bond angle0.680
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.4003.720
High resolution limit [Å]3.5803.580
Rmeas0.210
Number of reflections235861900
<I/σ(I)>9.97
Completeness [%]98.6
Redundancy6.6
CC(1/2)0.9900.840
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2910.06M Nitrate Phosphate Sulfate , 0.1M Sodium HEPES and MOPS (acid) pH 7.5, 20% Ethylene glycol, 10 % PEG 8000 + 2% w/v Benzamidine hydrochloride

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon