8EAD
Crystal structure of the first bromodomain (BD1) of human BRD4 in complex with dual BRD4-JAK2 inhibitor MA9-177
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-07-17 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.953, 44.416, 78.646 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.440 - 1.650 |
R-factor | 0.1532 |
Rwork | 0.151 |
R-free | 0.19480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7rel |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19_4085) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 1.680 |
High resolution limit [Å] | 1.650 | 4.470 | 1.650 |
Rmerge | 0.067 | 0.045 | 0.163 |
Rmeas | 0.076 | 0.051 | 0.206 |
Rpim | 0.035 | 0.023 | 0.123 |
Total number of observations | 59382 | ||
Number of reflections | 16124 | 942 | 707 |
<I/σ(I)> | 26.7 | ||
Completeness [%] | 96.7 | 100 | 88.3 |
Redundancy | 3.7 | 4.7 | 2.4 |
CC(1/2) | 0.994 | 0.935 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.2 M Ammonium sulphate, 0.15 M Sodium chloride, 0.1 M Tris (pH 8.5), 25 % w/v PEG 3,350 |