8EAB
NKG2D complexed with inhibitor 4f
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-30 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 101.621, 42.874, 67.881 |
Unit cell angles | 90.00, 107.87, 90.00 |
Refinement procedure
Resolution | 34.030 - 1.440 |
R-factor | 0.2006 |
Rwork | 0.199 |
R-free | 0.22640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1mpu |
RMSD bond length | 0.006 |
RMSD bond angle | 1.024 |
Data reduction software | DIALS |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.17.1_3660: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.530 | 35.540 | 1.460 |
High resolution limit [Å] | 1.440 | 3.910 | 1.440 |
Rmeas | 0.063 | 0.035 | 1.248 |
Rpim | 0.034 | 0.018 | 0.682 |
Total number of observations | 170411 | 9494 | 7895 |
Number of reflections | 50572 | 2625 | 2498 |
<I/σ(I)> | 8.5 | 25.8 | 0.9 |
Completeness [%] | 99.9 | 100 | 99.7 |
Redundancy | 3.4 | 3.6 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.15 - 0.22 M NaNO3 20 - 31 % (w/v) PEG 3350 |