8E6N

X-ray structure of the Deinococcus radiodurans Nramp/MntH divalent transition metal transporter G223W mutant in an outward-open, manganese-bound state

Replaces:  6BU5

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	APS BEAMLINE 24-ID-C
Synchrotron site	APS
Beamline	24-ID-C
Temperature [K]	100
Detector technology	PIXEL
Collection date	2017-04-15
Detector	DECTRIS PILATUS 6M-F
Wavelength(s)	0.9792
Spacegroup name	C 1 2 1
Unit cell lengths	105.758, 80.389, 51.754
Unit cell angles	90.00, 94.72, 90.00

Refinement procedure

Resolution	39.190 - 2.400
R-factor	0.2262
Rwork	0.224
R-free	0.27060
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	6c3i
Data reduction software	HKL-2000
Data scaling software	HKL-2000
Phasing software	PHASER
Refinement software	PHENIX (1.20.1_4487)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	39.190	2.490
High resolution limit [Å]	2.400	2.400
Rmerge	0.186
Rmeas	0.210
Rpim	0.095
Number of reflections	13962	621
<I/σ(I)>	6.2	1.6
Completeness [%]	82.1	36.4
Redundancy	3.5	1.7
CC(1/2)	0.980	0.580

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	LIPIDIC CUBIC PHASE	6	298	50 mM succinic acid, 10 mM spermidine, 5 mM manganese chloride, 100 mM MES, 28% PEG400