8E1E
Scaffolding protein functional sites using deep learning
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-18 |
Detector | DECTRIS EIGER2 S 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | I 2 3 |
Unit cell lengths | 234.092, 234.092, 234.092 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 95.570 - 4.270 |
R-factor | 0.4061 |
Rwork | 0.405 |
R-free | 0.42690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Designed model |
RMSD bond length | 0.003 |
RMSD bond angle | 0.702 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 117.050 | 4.760 |
High resolution limit [Å] | 4.260 | 4.260 |
Rmerge | 0.143 | 4.145 |
Number of reflections | 28776 | 4200 |
<I/σ(I)> | 22.1 | 1.2 |
Completeness [%] | 99.9 | |
Redundancy | 40.9 | |
CC(1/2) | 1.000 | 0.507 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | morphous c9 |