8DYK
Room temperature neutron structure of a fluorescent Ag8 cluster templated by a multistranded DNA scaffold
Experimental procedure
Experimental method | LAUE |
Source type | SPALLATION SOURCE |
Source details | ORNL Spallation Neutron Source BEAMLINE MANDI |
Synchrotron site | ORNL Spallation Neutron Source |
Beamline | MANDI |
Temperature [K] | 293 |
Detector technology | AREA DETECTOR |
Collection date | 2021-05-07 |
Detector | ORNL ANGER CAMERA |
Wavelength(s) | 2.0-4.0 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 33.568, 33.568, 63.741 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 12.260 - 2.100 |
R-factor | 0.2325 |
Rwork | 0.226 |
R-free | 0.28680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6niz |
RMSD bond length | 0.006 |
RMSD bond angle | 0.795 |
Data reduction software | Mantid |
Data scaling software | LAUENORM |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1-4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 12.260 | 2.175 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.146 | 0.264 |
Rmeas | 0.159 | 0.290 |
Rpim | 0.059 | 0.115 |
Number of reflections | 2315 | 216 |
<I/σ(I)> | 10.5 | 3.77 |
Completeness [%] | 96.5 | 95.15 |
Redundancy | 6.2 | 5.6 |
CC(1/2) | 0.991 | 0.328 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 1.5 mM A2C4, 9mM AgNO3, 70 mM cacodylate buffer (pH 6), 2-methyl-2,4-pentanediol (MPD) |