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8DTJ

Human NAMPT in complex with small molecule activator ZN-43-S

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2019-12-01
DetectorRAYONIX MX-300
Wavelength(s)0.9787
Spacegroup nameP 1 21 1
Unit cell lengths60.499, 107.483, 83.399
Unit cell angles90.00, 96.64, 90.00
Refinement procedure
Resolution19.668 - 2.118
R-factor0.2177
Rwork0.216
R-free0.24600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2e5d
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]19.84019.8402.180
High resolution limit [Å]2.1189.2302.120
Rmerge0.0840.0390.499
Total number of observations24367200
Number of reflections594076803923
<I/σ(I)>9.826.51.4
Completeness [%]98.589.584
Redundancy3.73.61.8
CC(1/2)0.9970.9960.742
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52900.1 M Tris-HCl, pH 8.5, 0.2 M NaCl, 20% glycerol and 13-18% PEG 3350

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