8DQT
Human PDK1 kinase domain in complex with Valsartan
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-02-17 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9801 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 148.510, 44.590, 48.210 |
Unit cell angles | 90.00, 101.32, 90.00 |
Refinement procedure
Resolution | 36.510 - 1.310 |
R-factor | 0.2004 |
Rwork | 0.199 |
R-free | 0.22420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3hrc |
RMSD bond length | 0.009 |
RMSD bond angle | 1.109 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.270 | 1.390 |
High resolution limit [Å] | 1.310 | 1.310 |
Rmeas | 0.055 | 1.306 |
Number of reflections | 73419 | 11539 |
<I/σ(I)> | 15.9 | 1 |
Completeness [%] | 99.4 | 97.4 |
Redundancy | 6.7 | 6.6 |
CC(1/2) | 0.999 | 0.744 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.8 | 293 | 1.2M sodium citrate, 0.1M Hepes pH 7.8 |