8DC6
Crystal structure of p53 Y220C covalently bound to indole KG6
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2021-12-16 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 91.040, 105.750, 105.750 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.293 - 1.600 |
R-factor | 0.182425826238 |
Rwork | 0.181 |
R-free | 0.20233 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2j1x |
RMSD bond length | 0.008 |
RMSD bond angle | 1.263 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 57.780 | 1.600 |
High resolution limit [Å] | 1.600 | 1.600 |
Number of reflections | 133925 | 13159 |
<I/σ(I)> | 20.3 | |
Completeness [%] | 99.0 | |
Redundancy | 2 | |
CC(1/2) | 0.999 | 0.947 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 100 mM HEPES, 2.2M MgSO4 |