8D3N
Crystal structure of human Apoptosis-Inducing Factor (AIF) complexed with 7-chloroquinolin-4-amine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-31 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.1158 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 91.317, 115.223, 122.479 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 83.920 - 2.250 |
R-factor | 0.208 |
Rwork | 0.206 |
R-free | 0.23660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4bv6 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.562 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 122.480 | 2.310 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.119 | 1.395 |
Rmeas | 0.126 | 1.478 |
Rpim | 0.042 | 0.483 |
Number of reflections | 61990 | 4523 |
<I/σ(I)> | 12.9 | 1.6 |
Completeness [%] | 99.9 | 100 |
Redundancy | 8.9 | 9.1 |
CC(1/2) | 0.999 | 0.702 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 295 | 0.1 M Tris, pH 8.5, 0.38 M Li2SO4, 21% PEG3350, 1 mM 7-chloroquinolin-4-amine |