8D3K
Crystal structure of human Apoptosis-Inducing Factor (AIF) complexed with 8-fluoro-2-methylquinolin-4-amine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-11 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.1159 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 91.389, 115.024, 124.121 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 71.550 - 2.300 |
R-factor | 0.1909 |
Rwork | 0.189 |
R-free | 0.21970 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4bv6 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.599 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 124.120 | 2.360 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.076 | 0.707 |
Rmeas | 0.079 | 0.735 |
Rpim | 0.022 | 0.199 |
Number of reflections | 58766 | 4468 |
<I/σ(I)> | 21.6 | 3.5 |
Completeness [%] | 99.9 | 99.8 |
Redundancy | 13.2 | 13.4 |
CC(1/2) | 0.999 | 0.939 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 295 | 0.1 M Tris, pH 8.5, 0.36 M Li2SO4, 25-26% PEG3350 |