8CMA
SARS-CoV-2 Delta-RBD complexed with BA.4/5-35 Fab
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-02-13 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.97625 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 195.782, 85.119, 56.974 |
Unit cell angles | 90.00, 102.03, 90.00 |
Refinement procedure
Resolution | 47.870 - 3.290 |
R-factor | 0.2325 |
Rwork | 0.231 |
R-free | 0.26790 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.437 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.000 | 3.350 |
High resolution limit [Å] | 3.290 | 3.290 |
Rmerge | 0.298 | |
Rpim | 0.121 | |
Number of reflections | 13926 | 680 |
<I/σ(I)> | 5.6 | 0.5 |
Completeness [%] | 98.9 | |
Redundancy | 7 | |
CC(1/2) | 0.982 | 0.340 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M Sodium citrate tribasic dihydrate pH 5.5, 18% w/v Polyethylene glycol 3,350 |