8CFI
Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with F2X-Entry library fragment D07
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-08-27 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.9184 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 176.420, 104.110, 107.880 |
Unit cell angles | 90.00, 100.21, 90.00 |
Refinement procedure
Resolution | 39.880 - 2.020 |
R-factor | 0.1927 |
Rwork | 0.192 |
R-free | 0.23360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6f3p |
RMSD bond length | 0.002 |
RMSD bond angle | 0.496 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | REFMAC |
Refinement software | PHENIX (1.19.2-4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.740 | 46.740 | 2.140 |
High resolution limit [Å] | 2.020 | 6.010 | 2.020 |
Rmerge | 0.128 | 0.029 | 1.383 |
Rmeas | 0.145 | 0.033 | 1.565 |
Number of reflections | 125371 | 4824 | 19951 |
<I/σ(I)> | 9.05 | ||
Completeness [%] | 99.4 | ||
Redundancy | 4.52 | ||
CC(1/2) | 0.996 | 0.999 | 0.392 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 291 | 50 mM KH2PO4, 20% (w/v) PEG8000, 20% (v/v) glycerol |