8CD9
Cathepsin B1 from Schistosoma mansoni in complex with gallinamide analog 6
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-29 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.918 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 33.062, 78.870, 90.139 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.435 - 1.550 |
Rwork | 0.178 |
R-free | 0.21570 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.701 |
Data reduction software | XDS (20210323) |
Data scaling software | XSCALE |
Phasing software | MOLREP (11.7.02) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.640 |
High resolution limit [Å] | 1.550 | 4.620 | 1.550 |
Rmerge | 0.154 | 0.041 | 1.801 |
Rmeas | 0.167 | 0.045 | 1.952 |
Number of reflections | 35093 | 1453 | 5478 |
<I/σ(I)> | 9.54 | 37.59 | 0.97 |
Completeness [%] | 99.2 | 98.6 | 97.1 |
Redundancy | 6.8 | ||
CC(1/2) | 0.997 | 0.999 | 0.477 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 291 | 0.2 M ammonium acetate, 0.1 M sodium citrate, 30% PEG 1500, streak seeding |