8C7F
Crystal structure of beta-xylosidase mutant (D281N, E517Q) from Thermotoga maritima in complex with xylopentaose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 175 |
Detector technology | PIXEL |
Collection date | 2022-12-10 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 98.350, 100.890, 179.110 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.445 - 1.520 |
Rwork | 0.164 |
R-free | 0.18850 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.591 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0405) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.445 | 1.550 |
High resolution limit [Å] | 1.520 | 1.520 |
Rmerge | 0.097 | 0.030 |
Rmeas | 0.114 | 0.036 |
Rpim | 0.060 | 0.019 |
Number of reflections | 272231 | 13322 |
<I/σ(I)> | 9.6 | |
Completeness [%] | 99.9 | |
Redundancy | 6.9 | 6.3 |
CC(1/2) | 0.999 | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.9 | 293 | 3% polyethylene glycol 8000, 48% 2-methyl-2,4-pentanediol, 0.1 M sodium cacodylate pH 5.9 |