8C3R
Crystal structure of DYRK1A in complex with gossypin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-18 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.000 |
Spacegroup name | P 63 |
Unit cell lengths | 132.126, 132.126, 90.485 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.360 - 2.060 |
R-factor | 0.1867 |
Rwork | 0.185 |
R-free | 0.20910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6eis |
RMSD bond length | 0.005 |
RMSD bond angle | 0.703 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.360 | 2.120 |
High resolution limit [Å] | 2.060 | 2.060 |
Rmerge | 0.095 | 1.519 |
Rmeas | 0.098 | 1.607 |
Rpim | 0.027 | 0.516 |
Total number of observations | 719290 | 38380 |
Number of reflections | 55250 | 4133 |
<I/σ(I)> | 18.6 | 1.5 |
Completeness [%] | 99.4 | |
Redundancy | 13 | 9.3 |
CC(1/2) | 0.999 | 0.518 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.1 M Bis-Tris pH 5.5, 0.2 M ammonium acetate, 25% PEG3350 |