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8BV2

Biological and structural analysis of new potent Integrase-LEDGF allosteric HIV-1 inhibitors

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-X
Temperature [K]120
Detector technologyPIXEL
Collection date2021-09-15
DetectorDECTRIS EIGER R 4M
Wavelength(s)1.5418
Spacegroup nameP 31 2 1
Unit cell lengths72.570, 72.570, 65.965
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution19.970 - 2.000
R-factor0.1985
Rwork0.196
R-free0.22620
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.024
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.20_4459)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.072
High resolution limit [Å]2.0002.000
Rmerge0.0290.199
Rmeas0.0300.209
Rpim0.0100.066
Number of reflections13158213489
<I/σ(I)>57.4311.2
Completeness [%]100.0100
Redundancy9.59.9
CC(1/2)1.0000.986
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52933 microliters of protein at 5 mg/mL in 50 mM MES pH5.5, 50 mM NaCl, 5 mM DTT mixed with 3 microliters of reservoir solution containing 0.1 M sodium cacodylate pH 6.5, 1.26 M ammonium sulfate.

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