8BV2
Biological and structural analysis of new potent Integrase-LEDGF allosteric HIV-1 inhibitors
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU FR-X |
| Temperature [K] | 120 |
| Detector technology | PIXEL |
| Collection date | 2021-09-15 |
| Detector | DECTRIS EIGER R 4M |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 31 2 1 |
| Unit cell lengths | 72.570, 72.570, 65.965 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 19.970 - 2.000 |
| R-factor | 0.1985 |
| Rwork | 0.196 |
| R-free | 0.22620 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.024 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20_4459) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 20.000 | 2.072 |
| High resolution limit [Å] | 2.000 | 2.000 |
| Rmerge | 0.029 | 0.199 |
| Rmeas | 0.030 | 0.209 |
| Rpim | 0.010 | 0.066 |
| Number of reflections | 131582 | 13489 |
| <I/σ(I)> | 57.43 | 11.2 |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 9.5 | 9.9 |
| CC(1/2) | 1.000 | 0.986 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 3 microliters of protein at 5 mg/mL in 50 mM MES pH5.5, 50 mM NaCl, 5 mM DTT mixed with 3 microliters of reservoir solution containing 0.1 M sodium cacodylate pH 6.5, 1.26 M ammonium sulfate. |






