8BPT
Crystal structure of the second bromodomain of BRD5 from Leishmania donovani
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04 |
| Synchrotron site | Diamond |
| Beamline | I04 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-07-01 |
| Detector | DECTRIS PILATUS 6M-F |
| Wavelength(s) | 0.9795 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 33.370, 75.356, 105.798 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 31.845 - 1.600 |
| Rwork | 0.162 |
| R-free | 0.21470 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5tck |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.402 |
| Data reduction software | xia2 |
| Data scaling software | Aimless |
| Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 31.845 | 31.820 | 1.630 |
| High resolution limit [Å] | 1.600 | 8.620 | 1.600 |
| Rmerge | 0.047 | 0.029 | 0.568 |
| Rmeas | 0.054 | 0.033 | 0.646 |
| Rpim | 0.025 | 0.015 | 0.304 |
| Number of reflections | 35399 | 273 | 1738 |
| <I/σ(I)> | 19.4 | ||
| Completeness [%] | 98.3 | ||
| Redundancy | 8.1 | 6.8 | 8.4 |
| CC(1/2) | 0.999 | 0.999 | 0.928 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | 0.1 M HEPES pH 7.5 and 1.4 M sodium citrate |






