Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8BOS

Transition state analogue complex of small G protein and its GAP effector

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2021-03-02
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.976
Spacegroup nameP 1 21 1
Unit cell lengths71.832, 41.558, 89.674
Unit cell angles90.00, 109.25, 90.00
Refinement procedure
Resolution84.660 - 2.100
R-factor0.20217
Rwork0.198
R-free0.27994
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1wq1
RMSD bond length0.007
RMSD bond angle1.437
Data reduction softwarexia2
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]84.6602.160
High resolution limit [Å]2.1002.100
Rmerge0.1760.659
Rmeas0.2130.821
Rpim0.1120.478
Number of reflections16248206
<I/σ(I)>12.61.7
Completeness [%]54.1
Redundancy3.42.8
CC(1/2)0.9810.552
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8293precipitant: HEPES-Na 100 mM pH = 8.0, PEG3350 22% (w/v), (NH4)2SO4 20 mM, Gd-HCl 100 mM, NaF 20 mM protein buffer: HRas 0.400 mM, RasGAP 0.400 mM, HEPES-Na 20 mM, NaF 20 mM drop size: 5 uL, protein:precipitant ratio: 1:1.2

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon