8BI5
Crystal structure of human Choline Kinase A in complex with UNC0737
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-23 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.976250 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 131.490, 131.490, 168.797 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.530 - 2.500 |
R-factor | 0.18821 |
Rwork | 0.187 |
R-free | 0.21279 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5eqp |
RMSD bond length | 0.006 |
RMSD bond angle | 1.354 |
Data reduction software | autoPROC |
Data scaling software | Aimless (0.7.3) |
Phasing software | PHASER (2.8.2) |
Refinement software | REFMAC (5.8.0232) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.250 | 2.580 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.063 | 0.370 |
Rmeas | 0.066 | 0.385 |
Rpim | 0.018 | 0.107 |
Total number of observations | 670428 | 57329 |
Number of reflections | 51852 | 4432 |
<I/σ(I)> | 26.9 | 7.7 |
Completeness [%] | 100.0 | |
Redundancy | 12.9 | 12.9 |
CC(1/2) | 0.999 | 0.974 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 6.5 | 294 | 30% PEG smear low molecular weight, 0.1 M MES pH 6.5 |