Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8BB3

Structure of human WDR5 and pVHL:ElonginC:ElonginB bound to PROTAC with PEG linker (conformation #1)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2022-02-11
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)0.999995
Spacegroup nameP 1 21 1
Unit cell lengths47.572, 189.858, 49.723
Unit cell angles90.00, 117.64, 90.00
Refinement procedure
Resolution42.910 - 1.800
R-factor0.1943
Rwork0.193
R-free0.22660
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7q2j
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER (2.8.3)
Refinement softwareREFMAC (5.8.0352)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.46047.4601.840
High resolution limit [Å]1.8009.0001.800
Rmerge0.0800.0321.047
Rmeas0.0880.0341.149
Rpim0.0360.0140.467
Total number of observations411472349023741
Number of reflections702626004054
<I/σ(I)>12.242.41.6
Completeness [%]97.79995.8
Redundancy5.95.85.9
CC(1/2)0.9990.9990.745
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.829321-26% PEG 3350 0.4-1 M KSCN 0.1 M HEPES

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon