8B92
Crystal structure of PPARG and NCOR2 with an inverse agonist (compound SI-2)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-01-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.257, 85.698, 120.399 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.260 - 1.660 |
R-factor | 0.1969 |
Rwork | 0.195 |
R-free | 0.22740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | internal |
RMSD bond length | 0.010 |
RMSD bond angle | 1.814 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.260 | 1.760 |
High resolution limit [Å] | 1.660 | 1.660 |
Rmeas | 0.092 | 1.965 |
Number of reflections | 74286 | 11836 |
<I/σ(I)> | 15.12 | 1.03 |
Completeness [%] | 99.9 | 99.8 |
Redundancy | 6.6 | 6.7 |
CC(1/2) | 0.999 | 0.353 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | PEG 6000 25%, TRIS 0.1 M (pH 8.0), ZnCl 0.01 M |