8B7E
The crystal structure of N828V variant of DNA Pol Epsilon containing UTP in the polymerase active site
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-03 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.96770 |
Spacegroup name | P 1 2 1 |
Unit cell lengths | 154.360, 69.990, 158.320 |
Unit cell angles | 90.00, 112.55, 90.00 |
Refinement procedure
Resolution | 26.750 - 2.600 |
R-factor | 0.1995 |
Rwork | 0.198 |
R-free | 0.23010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4m8o |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 78.390 | 78.390 | 2.640 |
High resolution limit [Å] | 2.600 | 14.240 | 2.600 |
Rmerge | 0.166 | 0.044 | 1.245 |
Rmeas | 0.189 | 0.053 | 1.406 |
Rpim | 0.089 | 0.029 | 0.643 |
Total number of observations | 405993 | 2238 | 20717 |
Number of reflections | 95522 | 642 | 4681 |
<I/σ(I)> | 6.8 | 13.3 | 1.4 |
Completeness [%] | 98.9 | 98.2 | 99.9 |
Redundancy | 4.3 | 3.5 | 4.4 |
CC(1/2) | 0.994 | 0.986 | 0.323 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 292 | 10mM Tris, 15% PEG8K,10mM CaCl2 |