8B5M
Crystal structure of GH47 alpha-1,2-mannosidase from Caulobacter K31 strain in complex with cyclosulfamidate inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-07-07 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.799 |
Spacegroup name | H 3 |
Unit cell lengths | 144.134, 144.134, 50.320 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 72.067 - 0.970 |
Rwork | 0.137 |
R-free | 0.14800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ayo |
RMSD bond length | 0.014 |
RMSD bond angle | 1.919 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 72.070 | 0.990 |
High resolution limit [Å] | 0.970 | 0.970 |
Rmerge | 0.155 | 1.490 |
Rpim | 0.050 | 0.490 |
Number of reflections | 230864 | 11558 |
<I/σ(I)> | 7.7 | 1.3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 10.2 | 10 |
CC(1/2) | 0.999 | 0.605 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291.15 | 23% PEG3350, 0.1 M MES pH 7.0, 0.2 M ammonium acetate |