8B5C
Human BRD4 bromdomain 1 in complex with a H4 peptide containing ApmTri (H4K5/8ApmTri)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-21 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 0.999867 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 42.527, 46.748, 58.902 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.620 - 1.580 |
R-factor | 0.1863 |
Rwork | 0.184 |
R-free | 0.20770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2oss |
RMSD bond length | 0.007 |
RMSD bond angle | 0.898 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.670 |
High resolution limit [Å] | 1.580 | 1.580 |
Number of reflections | 16702 | 2628 |
<I/σ(I)> | 11.47 | |
Completeness [%] | 99.8 | |
Redundancy | 7.3 | |
CC(1/2) | 0.999 | 0.520 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 200 mM sodium acetate trihydrate 100 mM Trishydrochloride pH 8.5 30% w/v PEG 4000 |