8AAJ
Crystal structure of the Pyrococcus abyssi RPA (apo form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-28 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.978565 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 116.526, 169.738, 201.855 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.350 - 3.700 |
R-factor | 0.239 |
Rwork | 0.238 |
R-free | 0.25470 |
Structure solution method | SAD |
RMSD bond length | 0.004 |
RMSD bond angle | 0.630 |
Data reduction software | XDS (VERSION Feb 5, 2021) |
Data scaling software | STARANISO (2.3.36) |
Phasing software | SHELXD |
Refinement software | BUSTER (2.10.4 (3-FEB-2022)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.350 | 3.800 |
High resolution limit [Å] | 3.700 | 3.700 |
Rmerge | 0.082 | 4.306 |
Rmeas | 0.083 | 4.390 |
Rpim | 0.016 | 0.844 |
Number of reflections | 13191 | 217 |
<I/σ(I)> | 21.4 | 1 |
Completeness [%] | 60.1 | 13.3 |
Redundancy | 27.6 | 26.8 |
CC(1/2) | 1.000 | 0.542 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 291 | 0.1M Tris pH 8.5 1.2M ammonium sulfate |