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8A32

p53 cancer mutant Y220C in complex with iodophenol-based small-molecule stabilizer JC769

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06SA
Synchrotron siteSLS
BeamlineX06SA
Temperature [K]100
Detector technologyPIXEL
Collection date2020-12-18
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.999998
Spacegroup nameP 21 21 21
Unit cell lengths65.119, 71.072, 105.315
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.010 - 1.470
R-factor0.165252272307
Rwork0.164
R-free0.19266
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)6shz
RMSD bond length0.006
RMSD bond angle0.839
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.0101.500
High resolution limit [Å]1.4701.470
Rmerge0.061
Number of reflections836394093
<I/σ(I)>15.51.7
Completeness [%]99.999.9
Redundancy66.2
CC(1/2)0.9990.842
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293Protein solution: 5.7 mg/ml protein in 25 mM sodium phosphate, pH 7.2, 150 mm NaCl, 0.5 mM TCEP. Reservoir buffer: 100 mm HEPES, pH 7.2, 19% (w/v) polyethylene glycol 4000, 5 mm DTT. Soaking buffer: 20 mM compound in 100 mm HEPES, pH 7.2, 10 mM sodium phosphate, pH 7.2, 19% (w/v) polyethylene glycol 4000, 20 % (v/v) glycerol, 150 mm NaCl.

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