8ZH7
Crystal structure of N-terminal domain of N-methyl-D-aspartate receptor subunit NR1 in complex with patient-derived antibody
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL32XU |
| Synchrotron site | SPring-8 |
| Beamline | BL32XU |
| Temperature [K] | 90 |
| Detector technology | PIXEL |
| Collection date | 2019-02-07 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 1 |
| Spacegroup name | P 31 |
| Unit cell lengths | 287.010, 287.010, 53.870 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 49.710 - 3.500 |
| R-factor | 0.18848 |
| Rwork | 0.186 |
| R-free | 0.22724 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.664 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 248.558 | 15.650 | 3.590 |
| High resolution limit [Å] | 3.500 | 11.070 | 3.500 |
| Rmerge | 0.268 | 0.098 | 2.794 |
| Rmeas | 0.271 | 0.099 | 2.833 |
| Number of reflections | 62589 | 1266 | 4752 |
| <I/σ(I)> | 16.03 | ||
| Completeness [%] | 100.0 | ||
| Redundancy | 42.3 | ||
| CC(1/2) | 0.998 | 0.998 | 0.482 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M MES or HEPES, pH6.5-7.5, and 6-8 %w/v PEG20000 |






