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8ZH7

Crystal structure of N-terminal domain of N-methyl-D-aspartate receptor subunit NR1 in complex with patient-derived antibody

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL32XU
Synchrotron siteSPring-8
BeamlineBL32XU
Temperature [K]90
Detector technologyPIXEL
Collection date2019-02-07
DetectorDECTRIS EIGER X 9M
Wavelength(s)1
Spacegroup nameP 31
Unit cell lengths287.010, 287.010, 53.870
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.710 - 3.500
R-factor0.18848
Rwork0.186
R-free0.22724
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle1.664
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]248.55815.6503.590
High resolution limit [Å]3.50011.0703.500
Rmerge0.2680.0982.794
Rmeas0.2710.0992.833
Number of reflections6258912664752
<I/σ(I)>16.03
Completeness [%]100.0
Redundancy42.3
CC(1/2)0.9980.9980.482
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.1 M MES or HEPES, pH6.5-7.5, and 6-8 %w/v PEG20000

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