8VME
Crystal structure of the GSK-3/Axin complex bound to a phosphorylated beta-catenin T41A peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-21 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.97949 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 82.257, 82.257, 280.990 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.470 - 2.300 |
R-factor | 0.1828 |
R-free | 0.22980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4nm7 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.164 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHENIX (1.20.1_4487) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.470 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.152 | 5.635 |
Rmeas | 0.154 | 5.768 |
Rpim | 0.026 | 1.201 |
Number of reflections | 26090 | 2435 |
<I/σ(I)> | 17.1 | 0.8 |
Completeness [%] | 99.9 | 98.8 |
Redundancy | 35.5 | 21.8 |
CC(1/2) | 1.000 | 0.399 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICRODIALYSIS | 7.5 | 277 | 10% PEG35000, 20 mM Tris, pH 7.5, 300 mM sodium chloride, 5% glycerol, 10 mM magnesium chloride, 200 uM ATP, 5 mM DTT |