8VBW
Structure of the monofunctional Staphylococcus aureus PBP1 in its beta-lactam (Ertapenem) inhibited form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08B1-1 |
Synchrotron site | CLSI |
Beamline | 08B1-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-17 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.5211 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 183.399, 72.717, 90.111 |
Unit cell angles | 90.00, 103.47, 90.00 |
Refinement procedure
Resolution | 46.030 - 2.300 |
R-factor | 0.1945 |
Rwork | 0.193 |
R-free | 0.23250 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.909 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.030 | 2.370 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.072 | 2.687 |
Rpim | 0.062 | |
Number of reflections | 51028 | 4391 |
<I/σ(I)> | 11.7 | |
Completeness [%] | 99.1 | 98.2 |
Redundancy | 4 | 4.1 |
CC(1/2) | 0.997 | 0.429 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 0.18M ammonium citrate, 22% PEG 3350 |