8UPA
Structure of gp130 in complex with a de novo designed IL-6 mimetic
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.033149 |
Spacegroup name | I 21 3 |
Unit cell lengths | 189.464, 189.464, 189.464 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.960 - 3.300 |
R-factor | 0.1971 |
Rwork | 0.193 |
R-free | 0.23610 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.568 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20_4459: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.960 | 3.421 |
High resolution limit [Å] | 3.300 | 3.300 |
Number of reflections | 32821 | 1660 |
<I/σ(I)> | 11.16 | |
Completeness [%] | 99.5 | |
Redundancy | 1.9 | |
CC(1/2) | 0.994 | 0.669 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.04M Potassium phosphate monobasic, 16% Polyethylene glycol 8,000, 20% Glycerol |