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8UI6

X-ray crystal structure of Toxoplasma gondii GalNAc-T3 in complex with UDP-GalNAc, Mn2+, and Muc5AC-3,13

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]100
Detector technologyCCD
Collection date2022-04-01
DetectorRAYONIX MX300-HS
Wavelength(s)1
Spacegroup nameP 2 21 21
Unit cell lengths61.252, 66.913, 163.581
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.980 - 2.650
R-factor0.1801
Rwork0.174
R-free0.23150
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.530
Data reduction softwareHKL-2000
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.700
High resolution limit [Å]2.6502.650
Rmerge0.1490.730
Rmeas0.1610.822
Rpim0.0600.370
Number of reflections20128961
<I/σ(I)>14.82.28
Completeness [%]100.099.8
Redundancy6.94.7
CC(1/2)0.9890.732
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP9.52930.1 M CHES pH 9.5 and 14-20% PEG 8000 (w/v)

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