8TJC
Structure of human beta 1,3-N-acetylglucosaminyltransferase 2 with compound 8a
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 5.0.2 |
| Synchrotron site | ALS |
| Beamline | 5.0.2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-08-30 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 89.410, 93.876, 205.066 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 47.010 - 2.200 |
| R-factor | 0.2295 |
| Rwork | 0.227 |
| R-free | 0.27530 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7jhk |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.588 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 47.010 | 2.400 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Rmerge | 0.161 | |
| Rmeas | 0.168 | |
| Rpim | 0.046 | |
| Number of reflections | 88402 | 4513 |
| <I/σ(I)> | 11 | 0.8 |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 13.3 | 13.8 |
| CC(1/2) | 0.999 | 0.398 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 277 | 0.1 M Tris 8.8, 0.16 M Sodium acetate, 25% PEG4000, 15% glycerol |






