8STT
Crystal Structure of HIV-1 Reverse Transcriptase (Y181C, V106A) varient in Complex with 8-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)indolizine-2-carbonitrile (JLJ555), a non-nucleoside inhibitor
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS-II BEAMLINE 17-ID-1 |
| Synchrotron site | NSLS-II |
| Beamline | 17-ID-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2022-10-19 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 0.9201 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 111.695, 73.006, 170.474 |
| Unit cell angles | 90.00, 97.60, 90.00 |
Refinement procedure
| Resolution | 54.790 - 2.620 |
| R-factor | 0.2647 |
| Rwork | 0.263 |
| R-free | 0.29110 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 8sts |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.643 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 110.710 | 2.770 |
| High resolution limit [Å] | 2.620 | 2.620 |
| Rmerge | 0.091 | 1.503 |
| Rmeas | 0.108 | 1.758 |
| Rpim | 0.057 | 0.905 |
| Total number of observations | 289932 | 43930 |
| Number of reflections | 81572 | 11839 |
| <I/σ(I)> | 5.1 | 0.6 |
| Completeness [%] | 99.6 | |
| Redundancy | 3.6 | 3.7 |
| CC(1/2) | 0.997 | 0.401 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 277 | 50 mM MES pH 6.0, 14% PEG 8000, 100 mM ammonium sulfate, 15 mM magnesium sulfate, and 5 mM spermine |






